class qsub:
def __init__(self):
+ self.afterok = None
self.hold = False
self.join = False
self.keep_stdout = False
self.keep_stderr = False
- self.node_type = ''
+ self.node_type = None
self.mail_abort = False
self.mail_begin = False
self.mail_end = False
- self.name = ''
- self.stdout = ''
- self.priority = 0
- self.queue = ''
- self.pbshost = ''
+ self.name = None
+ self.stdout = None
+ self.priority = None
+ self.queue = None
+ self.pbshost = None
self.qsub = 'qsub'
self.env = {}
if self.hold:
self.cmd.append('-h')
- if len(self.stdout):
+ if self.stdout:
self.cmd.append('-olocalhost:' + self.stdout)
if self.keep_stdout and self.keep_stderr:
if self.join:
self.cmd.append('-joe')
- if len(self.node_type):
+ if self.node_type:
self.cmd.append('-lnodes=' + self.node_type)
if self.mail_abort or self.mail_begin or self.mail_end:
flags.append('e')
if len(flags):
self.cmd.append('-m ' + flags)
+ else:
+ self.cmd.append('-mn')
- if len(self.name):
+ if self.name:
self.cmd.append("-N%s" % self.name)
- if self.priority != 0:
+ if self.priority:
self.cmd.append('-p' + self.priority)
- if len(self.queue):
+ if self.queue:
self.cmd.append('-q' + self.queue)
+ if self.afterok:
+ self.cmd.append('-Wdepend=afterok:%s' % self.afterok)
+
self.cmd.extend(args)
self.script = script
self.command = ' '.join(self.cmd + [ self.script ])